WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00004979 Phenotype Remark  slow larval development
Remark  Slow growing L1 or L2 larvae develop vacuolated and constipated intestines and accumulate highly refractive cytoplasmic granules, many have a double cuticle. Some eventually become necrotic, scrawny adults, some of which are sterile. Secondary Identifier  [cgc4538]:Ce-auxilin
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

3 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001043 dnj-25 W07A8.3 Caenorhabditis elegans
WBGene00012318 srxa-1 W07A8.1 Caenorhabditis elegans
WBGene00012321 srxa-6 W07A8.5 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W07A8.3d W07A8.3d 2361   V: 20730269-20730412
CDS:W07A8.3b W07A8.3b 1377   V: 20730269-20730412
CDS:W07A8.1 W07A8.1 963   V: 20732087-20732333
CDS:W07A8.3a W07A8.3a 2355   V: 20730269-20730412
CDS:W07A8.3c W07A8.3c 1326   V: 20730269-20730412
CDS:W07A8.5 W07A8.5 987   V: 20734983-20735217

0 Laboratories

3 Phenotype

Identifier Name Description
WBPhenotype:0000031 slow growth Any variation that causes a reduction in growth rate compared to control.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.
WBPhenotype:0000638 molt defect Animals exhibit defects in the process of periodic shedding, of part or all of its cuticle, during cuticle replacement that punctuates each larval stage.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004538

0 Strain