WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00087578 Genotype  axIs1137[pie-1::GFP:PAR-6]
Phenotype Remark  In par-2(RNAi) embryos (n=21), GFP:PAR-6 started out uniformly distributed at the cortex. As in wild type, when ruffling stopped in the posterior, GFP:PAR-6 disappeared from that area, eventually receding to 63% egg length (average from 11 time-lapse examinations). After pronuclear meeting, however, GFP:PAR-6 crept back towards the posterior. By cytokinesis, GFP:PAR-6 was found throughout the cortex. This behavior (initial asymmetry followed by loss of asymmetry) was observed in 2 independent GFP:PAR-6 lines (total of 21 time-lapse examinations). Remark  paper remark: Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003917 par-2 F58B6.3 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58B6.3e F58B6.3e 486   III: 1091647-1091697
CDS:F58B6.3c F58B6.3c 228   III: 1094240-1094374
CDS:F58B6.3a F58B6.3a 1887   III: 1081409-1081519
CDS:F58B6.3b F58B6.3b 1749   III: 1081409-1081519
CDS:F58B6.3d F58B6.3d 1746   III: 1081409-1081519

1 Laboratories

Primary Identifier
JH

1 Phenotype

Identifier Name Description
WBPhenotype:0000961 pattern of transgene expression variant Any variation in the cellular or subcellular pattern of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005735

0 Strain