WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00025854 Genotype  NL4256 rrf-3(pk1426)
Phenotype Remark  %lethal range Secondary Identifier  Simmer:K03A1.6

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

5 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001879 his-5 F45F2.3 Caenorhabditis elegans
WBGene00001892 his-18 K06C4.10 Caenorhabditis elegans
WBGene00001902 his-28 K06C4.2 Caenorhabditis elegans
WBGene00001912 his-38 K03A1.6 Caenorhabditis elegans
WBGene00001924 his-50 F07B7.9 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K03A1.6 K03A1.6 312   X: 7309564-7309875
CDS:F07B7.9 F07B7.9 312   V: 8847393-8847704
CDS:F45F2.3 F45F2.3 312   V: 8535214-8535525
CDS:K06C4.2 K06C4.2 312   V: 8889488-8889799
CDS:K06C4.10 K06C4.10 312   V: 8898228-8898539

1 Laboratories

Primary Identifier
NL

3 Phenotype

Identifier Name Description
WBPhenotype:0000697 protruding vulva Animals undergo incomplete vulval morphogenesis, resulting in the formation of a single protrusion at the site of the vulva.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000031 slow growth Any variation that causes a reduction in growth rate compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00006395

0 Strain