WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00099867 Genotype  rrf-3(pk1426); him-8(e1489)
Phenotype Remark  RNAi resulted in gonad defects Remark  (Table S1) Y53F4B.13 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013160 cmtr-1 Y53F4B.13 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53F4B.13a Y53F4B.13a 2757   II: 15026196-15026204
CDS:Y53F4B.13c Y53F4B.13c 1848   II: 15026196-15026204
CDS:Y53F4B.13b Y53F4B.13b 2694   II: 15026196-15026204
CDS:Y53F4B.13d Y53F4B.13d 1785   II: 15026196-15026204

1 Laboratories

Primary Identifier
DZ

1 Phenotype

Identifier Name Description
WBPhenotype:0000691 gonad development variant Variations in the progression of the organ that produces gametes over time, from its formation to the mature structure compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036019

0 Strain