WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00082700 Phenotype Remark  Underproliferation is mild.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

4 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000876 cyl-1 C52E4.6 Caenorhabditis elegans
WBGene00001553 gcy-33 F57F5.2 Caenorhabditis elegans
WBGene00008259 C52E4.7 C52E4.7 Caenorhabditis elegans
WBGene00194785 C52E4.12 C52E4.12 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C52E4.7 C52E4.7 855   V: 11994321-11994518
CDS:F57F5.2a F57F5.2a 2838   V: 11995868-11995993
CDS:C52E4.12 C52E4.12 186   V: 11996180-11996245
CDS:C52E4.6a C52E4.6a 1443   V: 11991164-11991238
CDS:F57F5.2b F57F5.2b 726   V: 11995868-11995993
CDS:F57F5.2c F57F5.2c 2844   V: 11995868-11995993

1 Laboratories

Primary Identifier
OP

4 Phenotype

Identifier Name Description
WBPhenotype:0000684 fewer germ cells Germ cell populations are reduced compared to control animals.
WBPhenotype:0000290 sperm absent Animals lack fully specialized male gametes that are competent for fertilization.
WBPhenotype:0000291 no oocytes Hermaphrodites lack fully specialized female gametes that are competent for fertilization.
WBPhenotype:0001028 nuclear appearance variant The morphological appearance of nuclei differs from control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036429

0 Strain