WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00094071 Genotype  dcap-1::RFP; rrf-3(ok629)
Phenotype Remark  RNAi resulted in enhanced formation of P bodies throughout the whole animal Remark  (Table S1) rpl-41 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004454 rpl-36A C09H10.2 Caenorhabditis elegans
WBGene00007504 nbs-1 C09H10.10 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09H10.2 C09H10.2 318   II: 11096617-11096677
CDS:C09H10.10a C09H10.10a 1089   II: 11095152-11095506
CDS:C09H10.10b C09H10.10b 1080   II: 11095152-11095497

1 Laboratories

Primary Identifier
HZ

3 Phenotype

Identifier Name Description
WBPhenotype:0000688 sterile Animals generate defective gametes, are otherwise unable to reproduce or they generate progeny that are unable to reproduce.
WBPhenotype:0001794 cytoplasmic processing body variant Discrete foci within the cytoplasm containing congregations of mRNA translational suppression and degradation mechanisms vary in their arrangement, clustering or are otherwise not well-defined compared to control.
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040559

0 Strain