WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00072684 Genotype  lin-35(n2239)
Phenotype Remark  RNAi phenotype in lin-35(n2239) worms was reproducibly stronger than those observed in WT (primary screen) and rrf-3(pk1426) (secondary screen) animals. Remark  candidate lin-35 interacting gene based on results of the secondary screen

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010719 K09E4.1 K09E4.1 Caenorhabditis elegans
WBGene00012230 cacn-1 W03H9.4 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03H9.4a W03H9.4a 1974   II: 14133584-14133820
CDS:W03H9.4c W03H9.4c 591   II: 14133584-14133820
CDS:W03H9.4b W03H9.4b 1038   II: 14133584-14133820
CDS:K09E4.1 K09E4.1 1104   II: 14137886-14138059

1 Laboratories

Primary Identifier
SV

4 Phenotype

Identifier Name Description
WBPhenotype:0000688 sterile Animals generate defective gametes, are otherwise unable to reproduce or they generate progeny that are unable to reproduce.
WBPhenotype:0000164 thin Animals exhibit a reduced girth compared to a control animal of the same developmental stage.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.
WBPhenotype:0000229 small Animals are shorter and thinner than control animals at the same developmental stage.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00029258

0 Strain