WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00064722 Remark  Genetic enhancer interactions are identified by comparing RNAi phenotypes of library genes in wild-type animals with those seen in mutant worms carrying a defined lesion in a single query gene; a genetic interaction between a query gene and a library gene is observed if the phenotype of the combined perturbation is greater than the sum of the two individual perturbations.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003015 lin-29 W03C9.4 Caenorhabditis elegans

12 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03C9.4b W03C9.4b 1368   II: 11918339-11918546
CDS:W03C9.4c W03C9.4c 954   II: 11918339-11918546
CDS:W03C9.4j W03C9.4j 942   II: 11918339-11918546
CDS:W03C9.4k W03C9.4k 951   II: 11918339-11918546
CDS:W03C9.4e W03C9.4e 1362   II: 11918339-11918546
CDS:W03C9.4f W03C9.4f 1365   II: 11918339-11918546
CDS:W03C9.4h W03C9.4h 1377   II: 11918339-11918546
CDS:W03C9.4i W03C9.4i 1383   II: 11918339-11918546
CDS:W03C9.4a W03C9.4a 1374   II: 11918339-11918546
CDS:W03C9.4d W03C9.4d 1356   II: 11918339-11918546
CDS:W03C9.4g W03C9.4g 1371   II: 11918339-11918546
CDS:W03C9.4l W03C9.4l 963   II: 11918339-11918546

1 Laboratories

Primary Identifier
ANF

1 Phenotype

Identifier Name Description
WBPhenotype:0000688 sterile Animals generate defective gametes, are otherwise unable to reproduce or they generate progeny that are unable to reproduce.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00027756

1 Strain

WormBase ID
WBStrain00008029