WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00016748 Secondary Identifier  JA:K07F5.3

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

10 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003425 msp-10 K07F5.2 Caenorhabditis elegans
WBGene00003434 msp-38 K08F4.8 Caenorhabditis elegans
WBGene00003464 msp-77 F32B6.6 Caenorhabditis elegans
WBGene00003465 msp-78 T13F2.11 Caenorhabditis elegans
WBGene00003463 msp-76 ZK1251.6 Caenorhabditis elegans
WBGene00003466 msp-79 T13F2.10 Caenorhabditis elegans
WBGene00003467 msp-81 K07F5.1 Caenorhabditis elegans
WBGene00003449 msp-56 K07F5.3 Caenorhabditis elegans
WBGene00045180 K07F5.17 K07F5.17 Caenorhabditis elegans
WBGene00003432 msp-36 C04G2.4 Caenorhabditis elegans

10 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1251.6 ZK1251.6 384   IV: 9689015-9689398
CDS:T13F2.10 T13F2.10 384   IV: 9766771-9767154
CDS:T13F2.11 T13F2.11 384   IV: 9770046-9770429
CDS:K07F5.1 K07F5.1 384   IV: 9836034-9836417
CDS:K07F5.17 K07F5.17 417   IV: 9842428-9842511
CDS:C04G2.4 C04G2.4 384   IV: 10095433-10095816
CDS:K08F4.8 K08F4.8 384   IV: 10143357-10143740
CDS:F32B6.6 F32B6.6 384   IV: 9894631-9895014
CDS:K07F5.2 K07F5.2 384   IV: 9837649-9838032
CDS:K07F5.3 K07F5.3 384   IV: 9841540-9841923

1 Laboratories

Primary Identifier
JA

0 Phenotype

8 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000031 slow growth Any variation that causes a reduction in growth rate compared to control.
WBPhenotype:0000054 larval lethal The animal dies at any time between hatching and onset to adulthood.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.
WBPhenotype:0001037 sterile progeny Any variation that compromises the reproductive ability of the progeny of an animal.
WBPhenotype:0000049 postembryonic development variant Any variation in the progression of an animal over time, from hatching to adulthood, compared to control.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005654

0 Strain