WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00019833 Secondary Identifier  JA:Y105C5A.c

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

5 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000028 abu-5 Y105C5A.4 Caenorhabditis elegans
WBGene00013526 Y73F8A.20 Y73F8A.20 Caenorhabditis elegans
WBGene00004158 pqn-76 Y105C5A.3 Caenorhabditis elegans
WBGene00004159 pqn-78 Y105C5A.5 Caenorhabditis elegans
WBGene00004160 pqn-79 Y105C5A.6 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105C5A.4 Y105C5A.4 1008   IV: 15590697-15590750
CDS:Y73F8A.20 Y73F8A.20 1626   IV: 15378503-15378527
CDS:Y105C5A.3 Y105C5A.3 1008   IV: 15579086-15579139
CDS:Y105C5A.5 Y105C5A.5 1008   IV: 15593960-15594913
CDS:Y105C5A.6 Y105C5A.6 1008   IV: 15595570-15595623

1 Laboratories

Primary Identifier
JA

0 Phenotype

8 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000031 slow growth Any variation that causes a reduction in growth rate compared to control.
WBPhenotype:0000054 larval lethal The animal dies at any time between hatching and onset to adulthood.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.
WBPhenotype:0001037 sterile progeny Any variation that compromises the reproductive ability of the progeny of an animal.
WBPhenotype:0000049 postembryonic development variant Any variation in the progression of an animal over time, from hatching to adulthood, compared to control.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005654

0 Strain