WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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RNAi :

WormBase ID  WBRNAi00020810 Secondary Identifier  JA:Y4C6A.c

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

11 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003426 msp-19 F36H12.7 Caenorhabditis elegans
WBGene00003448 msp-55 C09B9.6 Caenorhabditis elegans
WBGene00003451 msp-58 ZK354.10 Caenorhabditis elegans
WBGene00003429 msp-31 R05F9.13 Caenorhabditis elegans
WBGene00003450 msp-57 R13H9.2 Caenorhabditis elegans
WBGene00003446 msp-53 R13H9.4 Caenorhabditis elegans
WBGene00022002 Y59E9AR.7 Y59E9AR.7 Caenorhabditis elegans
WBGene00003444 msp-51 ZK354.5 Caenorhabditis elegans
WBGene00003468 msp-113 ZK354.4 Caenorhabditis elegans
WBGene00003452 msp-59 ZK354.11 Caenorhabditis elegans
WBGene00003458 msp-65 ZK354.1 Caenorhabditis elegans

11 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09B9.6 C09B9.6 384   IV: 5055631-5056014
CDS:R13H9.4 R13H9.4 384   IV: 5064678-5065061
CDS:Y59E9AR.7 Y59E9AR.7 393   IV: 5241402-5241794
CDS:F36H12.7 F36H12.7 384   IV: 5260589-5260972
CDS:ZK354.10 ZK354.10 234   IV: 5308593-5308826
CDS:R05F9.13 R05F9.13 384   II: 4916179-4916562
CDS:R13H9.2 R13H9.2 384   IV: 5062578-5062961
CDS:ZK354.1 ZK354.1 384   IV: 5316523-5316906
CDS:ZK354.4 ZK354.4 384   IV: 5297962-5298345
CDS:ZK354.5 ZK354.5 384   IV: 5294957-5295340
CDS:ZK354.11 ZK354.11 384   IV: 5312728-5313111

1 Laboratories

Primary Identifier
JA

0 Phenotype

8 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000031 slow growth Any variation that causes a reduction in growth rate compared to control.
WBPhenotype:0000054 larval lethal The animal dies at any time between hatching and onset to adulthood.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.
WBPhenotype:0001037 sterile progeny Any variation that compromises the reproductive ability of the progeny of an animal.
WBPhenotype:0000049 postembryonic development variant Any variation in the progression of an animal over time, from hatching to adulthood, compared to control.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005654

0 Strain