WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00075630 Phenotype Remark  Progeny viability lowered. The inviable embryos produced by fbf(RNAi); him-5 males often proceeded well into embryogenesis: Embryos elongated and possessed differentiated tissues, such as gut and pharynx. Paternal fbf appears to be important for embryonic viability.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001401 fbf-1 H12I13.4 Caenorhabditis elegans
WBGene00001402 fbf-2 F21H12.5 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H12I13.4 H12I13.4 1845   II: 6078550-6078748
CDS:F21H12.5 F21H12.5 1899   II: 6089142-6089388

1 Laboratories

Primary Identifier
MW

3 Phenotype

Identifier Name Description
WBPhenotype:0000670 spermatogenesis variant Any variation in the processes that influence the generation and maturation of spermatozoa (motile sperm) compared to control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000843 male mating efficiency reduced The number of cross progeny sired by males is reduced compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004396

1 Strain

WormBase ID
WBStrain00000001