WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00071728 Genotype  integrated translational fusion transgene rme-2::GFP
Phenotype Remark  RNAi treatment resulted in punctate accumulation of RME-2-GFP throughout the cytoplasm (mixed secretion). Remark  Secondary screen. Candidate secretion regulator based on RME-2-GFP localization (this experiment) and/or yolk uptake by oocytes (primary screen).

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001184 egl-15 F58A3.2 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A3.2g F58A3.2g 3141   X: 11016441-11016528
CDS:F58A3.2l F58A3.2l 3120   X: 11016441-11016528
CDS:F58A3.2a F58A3.2a 3123   X: 11016441-11016528
CDS:F58A3.2b F58A3.2b 2967   X: 11016441-11016528
CDS:F58A3.2f F58A3.2f 3276   X: 11016441-11016528
CDS:F58A3.2h F58A3.2h 3462   X: 11016441-11016528
CDS:F58A3.2n F58A3.2n 2985   X: 11016441-11016528
CDS:F58A3.2p F58A3.2p 3306   X: 11016441-11016528

1 Laboratories

Primary Identifier
RT

1 Phenotype

Identifier Name Description
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00030951

0 Strain