WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00093481 Genotype  Pnhx-2::CPL-1(W32A,Y35A)::YFP
Phenotype Remark  cdc-48 RNAi resulted in an accumulation of mutant transgenic CPL-1(W32A,Y35A)::YFP in the endoplasmic reticulum Remark  (Figure 4A) cdc-48.1, cdc-48.2 double RNAi
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

3 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007352 cdc-48.1 C06A1.1 Caenorhabditis elegans
WBGene00008053 cdc-48.2 C41C4.8 Caenorhabditis elegans
WBGene00045152 C06A1.9 C06A1.9 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41C4.8 C41C4.8 2433   II: 8138511-8138582
CDS:C06A1.1 C06A1.1 2430   II: 10560333-10560468

1 Laboratories

Primary Identifier
VK

1 Phenotype

Identifier Name Description
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00041269

1 Strain

WormBase ID
WBStrain00040048