WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00106536 Genotype  FIB-1::GFP
Phenotype Remark  RNAi resulted in mislocalized FIB-1::GFP; FIB-1::GFP no longer localized exclusively to the nucleolus of intestinal nuclei, unlike controls Remark  (Figure 1, S1B) daf-15 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000911 daf-15 C10C5.6 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10C5.6c C10C5.6c 5403   IV: 9386208-9386272
CDS:C10C5.6a C10C5.6a 5331   IV: 9386464-9386538
CDS:C10C5.6d C10C5.6d 5340   IV: 9386464-9386538
CDS:C10C5.6b C10C5.6b 5349   IV: 9386464-9386538
CDS:C10C5.6e C10C5.6e 5358   IV: 9386464-9386538

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00047025

0 Strain