WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00103829 Phenotype Remark  The cadherin-catenin complex (CCC) is lost from the apical cell junctions upon muscle twitching in ulp-2(RNAi) embryos, whereas the DLG-1/AJM-1 complex (DAC) (DLG-1::RFP) is not affected.
Remark  (Figure 7A,B) ulp-2 RNAi against exons 1-4 and 15

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006737 ulp-2 Y38A8.3 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38A8.3b Y38A8.3b 2136   II: 4956006-4956392
CDS:Y38A8.3c Y38A8.3c 1005   II: 4956006-4956392
CDS:Y38A8.3a Y38A8.3a 2682   II: 4956006-4956392

0 Laboratories

3 Phenotype

Identifier Name Description
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0001658 intercellular junction variant Animals exhibit variations in the specialized region of connection between two cells compared to control.
WBPhenotype:0002132 protein complex organization variant The formation, organization, or stability of a protein complex is altered in comparison to corresponding complexes in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00048594

0 Strain