WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00071872 Genotype  integrated translational fusion transgene rme-2::GFP
Remark  Secondary screen. Candidate endocytosis regulator based on RME-2-GFP localization (this experiment) and/or yolk uptake by oocytes (primary screen).

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001330 eps-8 Y57G11C.24 Caenorhabditis elegans

11 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.24n Y57G11C.24n 2832   IV: 14879563-14879615
CDS:Y57G11C.24o Y57G11C.24o 2757   IV: 14879563-14879615
CDS:Y57G11C.24h Y57G11C.24h 2223   IV: 14879566-14879615
CDS:Y57G11C.24i Y57G11C.24i 2829   IV: 14879566-14879615
CDS:Y57G11C.24a Y57G11C.24a 2589   IV: 14885688-14885703
CDS:Y57G11C.24d Y57G11C.24d 2538   IV: 14886649-14886834
CDS:Y57G11C.24e Y57G11C.24e 1998   IV: 14891466-14891774
CDS:Y57G11C.24g Y57G11C.24g 2754   IV: 14879566-14879615
CDS:Y57G11C.24j Y57G11C.24j 2664   IV: 14885688-14885703
CDS:Y57G11C.24k Y57G11C.24k 2613   IV: 14886649-14886834
CDS:Y57G11C.24l Y57G11C.24l 2073   IV: 14891466-14891774

1 Laboratories

Primary Identifier
RT

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00030951

0 Strain