WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00076128 Genotype  Punc-54::a-syn::gfp, Punc-54::tor-2
Remark  RNAi treatment caused no lethality or enhanced aggregation of a-syn.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

10 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008591 F08H9.3 F08H9.3 Caenorhabditis elegans
WBGene00015796 C15F1.5 C15F1.5 Caenorhabditis elegans
WBGene00006344 sup-39 C15F1.9 Caenorhabditis elegans
WBGene00006315 sup-6 F58G1.10 Caenorhabditis elegans
WBGene00194993 T27E4.11 T27E4.11 Caenorhabditis elegans
WBGene00044923 T27E4.10 T27E4.10 Caenorhabditis elegans
WBGene00014511 T08G5.11 T08G5.11 Caenorhabditis elegans
WBGene00014370 F40G12.13 F40G12.13 Caenorhabditis elegans
WBGene00014316 F08H9.10 F08H9.10 Caenorhabditis elegans
WBGene00014317 F08H9.11 F08H9.11 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C15F1.5b C15F1.5b 936   II: 6967982-6968038
CDS:C15F1.5a C15F1.5a 1146   II: 6967982-6968038

1 Laboratories

Primary Identifier
UA

0 Phenotype

3 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0001405 protein aggregation variant Variations that result in the accumulation of soluble/insoluble protein aggregates in a particular cell or tissue, compared to control. Protein aggregates are often formed by interactions between misfolded protein molecules and/or deficiencies in proper protein folding.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031384

0 Strain