WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00076574 Genotype  Punc-54::a-syn::gfp, Punc-54::tor-2
Remark  RNAi treatment caused no lethality or enhanced aggregation of a-syn.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003400 dapk-1 K12C11.4 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K12C11.4b K12C11.4b 3795   I: 1308011-1308198
CDS:K12C11.4c K12C11.4c 3090   I: 1311009-1311290
CDS:K12C11.4a K12C11.4a 4278   I: 1305575-1305681
CDS:K12C11.4d K12C11.4d 2784   I: 1316674-1317180

1 Laboratories

Primary Identifier
UA

0 Phenotype

3 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0001405 protein aggregation variant Variations that result in the accumulation of soluble/insoluble protein aggregates in a particular cell or tissue, compared to control. Protein aggregates are often formed by interactions between misfolded protein molecules and/or deficiencies in proper protein folding.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031384

0 Strain