WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00106109 Phenotype Remark  RNAi caused 75% or less of the population to be found on food (Table S1)
Remark  eps-8 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001330 eps-8 Y57G11C.24 Caenorhabditis elegans
WBGene00014594 Y57G11C.t1 Y57G11C.t1 Caenorhabditis elegans

12 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.24n Y57G11C.24n 2832   IV: 14879563-14879615
CDS:Y57G11C.24o Y57G11C.24o 2757   IV: 14879563-14879615
CDS:Y57G11C.24h Y57G11C.24h 2223   IV: 14879566-14879615
CDS:Y57G11C.24i Y57G11C.24i 2829   IV: 14879566-14879615
CDS:Y57G11C.24a Y57G11C.24a 2589   IV: 14885688-14885703
CDS:Y57G11C.24m Y57G11C.24m 540   IV: 14897461-14897505
CDS:Y57G11C.24d Y57G11C.24d 2538   IV: 14886649-14886834
CDS:Y57G11C.24e Y57G11C.24e 1998   IV: 14891466-14891774
CDS:Y57G11C.24g Y57G11C.24g 2754   IV: 14879566-14879615
CDS:Y57G11C.24j Y57G11C.24j 2664   IV: 14885688-14885703
CDS:Y57G11C.24k Y57G11C.24k 2613   IV: 14886649-14886834
CDS:Y57G11C.24l Y57G11C.24l 2073   IV: 14891466-14891774

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000662 foraging behavior variant Variations in the behavior by which an organism locates food compared to control animals. In C. elegans roaming or dwelling activity on food are two examples of parameters used to assess this behavior. Roaming is defined as moving in a high-speed forward direction with brief backward movement, often traversing wide regions. Dwelling is defined as low-speed/high turning movement restricted to a confined region.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00047025

1 Strain

WormBase ID
WBStrain00000001