WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00084193 Phenotype Remark  RNAi-mediated depletion of fln-1 results in a highly penetrant spermathecal exit defect during ovulation and animals accumulate embryos in the spermatheca (Data not shown).
Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022048 fln-1 Y66H1B.2 Caenorhabditis elegans

18 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y66H1B.2a Y66H1B.2a 6768   IV: 359584-359619
CDS:Y66H1B.2f Y66H1B.2f 6615   IV: 359584-359619
CDS:Y66H1B.2h Y66H1B.2h 6774   IV: 359584-359619
CDS:Y66H1B.2i Y66H1B.2i 6774   IV: 359584-359619
CDS:Y66H1B.2m Y66H1B.2m 6366   IV: 359584-359619
CDS:Y66H1B.2n Y66H1B.2n 6213   IV: 359584-359619
CDS:Y66H1B.2q Y66H1B.2q 6372   IV: 359584-359619
CDS:Y66H1B.2s Y66H1B.2s 6225   IV: 359584-359619
CDS:Y66H1B.2t Y66H1B.2t 6378   IV: 359584-359619
CDS:Y66H1B.2b Y66H1B.2b 3255   IV: 370363-371090
CDS:Y66H1B.2c Y66H1B.2c 2511   IV: 359584-359619
CDS:Y66H1B.2g Y66H1B.2g 6621   IV: 359584-359619
CDS:Y66H1B.2j Y66H1B.2j 6621   IV: 359584-359619
CDS:Y66H1B.2k Y66H1B.2k 6627   IV: 359584-359619
CDS:Y66H1B.2l Y66H1B.2l 6780   IV: 359584-359619
CDS:Y66H1B.2o Y66H1B.2o 6219   IV: 359584-359619
CDS:Y66H1B.2p Y66H1B.2p 6372   IV: 359584-359619
CDS:Y66H1B.2r Y66H1B.2r 6219   IV: 359584-359619

1 Laboratories

Primary Identifier
UN

1 Phenotype

Identifier Name Description
WBPhenotype:0000666 ovulation variant Any variation that disrupts the release of a mature oocyte into the spermatheca (for subsequent fertilization), compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00037051

0 Strain