WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00090706 Genotype  hsp-4p::GFP (zcIs4)
Phenotype Remark  icd-1 RNAi induced expression of the hsp-4p::GFP transgene, particularly in embryonic gut and epithelial cells. icd-1 RNAi also resulted in severe morphological defects and increases in cell death and degeneration. Remark  (Figure 2,3) icd-1 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002045 icd-1 C56C10.8 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C56C10.8 C56C10.8 486   II: 6587967-6588025

0 Laboratories

4 Phenotype

Identifier Name Description
WBPhenotype:0001236 transgene expression increased Any increase in the intensity of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0000729 cell death variant Animals exhibit variations in any of the processes that lead to the termination of vital functions of a cell.
WBPhenotype:0000178 cell degeneration Cells are observed to undergo a dramatic decrease in cell volume, collapse of the vacuoles, and complete disintegration of the plasma membrane and most organelles.
WBPhenotype:0000934 developmental morphology variant Animals exhibit variations in the form, structure or composition of any of its parts during a given developmental stage compared to control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00041512

1 Strain

WormBase ID
WBStrain00034065