WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00097015 Genotype  rrf-3(pk1426)
Phenotype Remark  Unlike controls, no measurable increase in the number of apoptotic corpses was detected in the germ line of atm-1(RNAi) animals following ionizing radiation Remark  (Figure S5B) atm-1 RNAi. Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000227 atm-1 Y48G1BL.2 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G1BL.2a Y48G1BL.2a 7137   I: 183376-183456
CDS:Y48G1BL.2b Y48G1BL.2b 5106   I: 192695-193095

1 Laboratories

Primary Identifier
DW

2 Phenotype

Identifier Name Description
WBPhenotype:0000712 germ cell ionizing radiation response variant Germ cells exhibit variations in their response to ionizing radiation compared to that observed in control animals.
WBPhenotype:0002045 cell corpse number decreased Animals exhibit fewer cell corpses compared to controls at the same developmental life stage.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00026962

0 Strain