WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00099033 Phenotype Remark  frk-1 RNA largely restores the loss of gut differentiation in a wrm-1 RNAi background.
Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. Method of delivery not explicit, authors say injection or soaking.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001487 frk-1 T04B2.2 Caenorhabditis elegans
WBGene00006943 wrm-1 B0336.1 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04B2.2a T04B2.2a 1173   IV: 10044263-10044564
CDS:B0336.1a B0336.1a 2391   III: 5722883-5722907
CDS:B0336.1b B0336.1b 2229   III: 5723639-5723782

1 Laboratories

Primary Identifier
JR

1 Phenotype

Identifier Name Description
WBPhenotype:0000708 intestinal development variant Variations in the progression of the intestine over time from its initial formation to its mature structure compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00037107

0 Strain