WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00098795 Genotype  nmy-2(n1490)
Phenotype Remark  nmy-2(n1490) mutants failed to enhance the weak endoderm-specification defects associated with src-1 RNAi. src-1(RNAi) had 5 percent of animals lacking intestine, in this mutant background in was only 7 percent. Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. Method of delivery not explicit, authors say injection or feeding. 20C is the semipermissive temp for nmy-2 allele used in this experiment.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005077 src-1 Y92H12A.1 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y92H12A.1a Y92H12A.1a 1602   I: 1567609-1567685
CDS:Y92H12A.1b Y92H12A.1b 1614   I: 1567609-1567685
CDS:Y92H12A.1c Y92H12A.1c 1434   I: 1570440-1570681
CDS:Y92H12A.1d Y92H12A.1d 678   I: 1577400-1577868

1 Laboratories

Primary Identifier
WM

2 Phenotype

Identifier Name Description
WBPhenotype:0001637 no Intestine Embryos fail to generate cells that exhibit intestinal specification. In C. elegans, the E blastomere is the precursor of all the intestinal cells.
WBPhenotype:0000708 intestinal development variant Variations in the progression of the intestine over time from its initial formation to its mature structure compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00035593

0 Strain