WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00098794 Phenotype Remark  Weak endoderm-specification defects, 5 percent of animals lacking intestine.
Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. Method of delivery not explicit, authors say injection or feeding.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005077 src-1 Y92H12A.1 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y92H12A.1a Y92H12A.1a 1602   I: 1567609-1567685
CDS:Y92H12A.1b Y92H12A.1b 1614   I: 1567609-1567685
CDS:Y92H12A.1c Y92H12A.1c 1434   I: 1570440-1570681
CDS:Y92H12A.1d Y92H12A.1d 678   I: 1577400-1577868

1 Laboratories

Primary Identifier
WM

2 Phenotype

Identifier Name Description
WBPhenotype:0001637 no Intestine Embryos fail to generate cells that exhibit intestinal specification. In C. elegans, the E blastomere is the precursor of all the intestinal cells.
WBPhenotype:0000708 intestinal development variant Variations in the progression of the intestine over time from its initial formation to its mature structure compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00035593

0 Strain