WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00086213 Genotype  lin-15AB(n765)
Phenotype Remark  RNAi of the 3 end of nurf-1 (3 end of isoforms b, c, d, and e) did not affect the the multivulva phenotype of lin-15AB(n765) Remark  Authors state that the pEA30 clone (a cDNA encoding the 3 end of nurf-1b, c, d and e) was used to target nurf-1 gene for knockdown by RNAi; spliced sequence of nurf-1e (WS225) used for curation

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009180 nurf-1 F26H11.2 Caenorhabditis elegans

12 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26H11.2a F26H11.2a 6594   II: 14390720-14391012
CDS:F26H11.2s F26H11.2s 6600   II: 14390720-14391012
CDS:F26H11.2n F26H11.2n 6591   II: 14390720-14391012
CDS:F26H11.2l F26H11.2l 6228   II: 14391754-14392340
CDS:F26H11.2m F26H11.2m 6222   II: 14391754-14392340
CDS:F26H11.2e F26H11.2e 1218   II: 14404654-14404684
CDS:F26H11.2f F26H11.2f 1533   II: 14405545-14405890
CDS:F26H11.2c F26H11.2c 6585   II: 14390720-14391012
CDS:F26H11.2d F26H11.2d 2427   II: 14400082-14400531
CDS:F26H11.2j F26H11.2j 435   II: 14407276-14407351
CDS:F26H11.2o F26H11.2o 1707   II: 14401682-14401783
CDS:F26H11.2p F26H11.2p 1359   II: 14403527-14403698

1 Laboratories

Primary Identifier
MT

1 Phenotype

Identifier Name Description
WBPhenotype:0000700 multivulva Multiple vulva-like protrusions are present along the ventral side of the animal. In C. elegans, this is usually a result of all six vulval precursor cells adopting primary or secondary vulval fates.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00027681

0 Strain