WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00086255 Genotype  lin-1(n304)
Phenotype Remark  RNAi of nurf-1a failed to suppress the multivulva phenotype of lin-1(n304) mutants Remark  Authors state that the pEA147 (a RT-PCR product corresponding to only nurf-1a) was used to target nurf-1 gene for knockdown by RNAi; spliced sequence of nurf-1a (WS225) used for curation

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009180 nurf-1 F26H11.2 Caenorhabditis elegans

12 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26H11.2a F26H11.2a 6594   II: 14390720-14391012
CDS:F26H11.2b F26H11.2b 4866   II: 14390720-14391012
CDS:F26H11.2i F26H11.2i 4860   II: 14390720-14391012
CDS:F26H11.2s F26H11.2s 6600   II: 14390720-14391012
CDS:F26H11.2n F26H11.2n 6591   II: 14390720-14391012
CDS:F26H11.2l F26H11.2l 6228   II: 14391754-14392340
CDS:F26H11.2m F26H11.2m 6222   II: 14391754-14392340
CDS:F26H11.2r F26H11.2r 702   II: 14400082-14400531
CDS:F26H11.2c F26H11.2c 6585   II: 14390720-14391012
CDS:F26H11.2d F26H11.2d 2427   II: 14400082-14400531
CDS:F26H11.2k F26H11.2k 4866   II: 14390720-14391012
CDS:F26H11.2q F26H11.2q 708   II: 14400082-14400531

1 Laboratories

Primary Identifier
MT

1 Phenotype

Identifier Name Description
WBPhenotype:0000700 multivulva Multiple vulva-like protrusions are present along the ventral side of the animal. In C. elegans, this is usually a result of all six vulval precursor cells adopting primary or secondary vulval fates.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00027681

0 Strain