WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00078173 Phenotype Remark  Worms displayed deficiencies in maintaining epithelial integrity and vacuolation of the hypodermis was observed. The degeneration of the hypodermis was confirmed using the membrane-impermeable dye Hoechst 33258, which fluoresces when bound to DNA and thus stains nuclei of permeable, but not impermeable, living cells. When cuti-1(RNAi) worms were suspended in buffer containing Hoechst 33258, all worms showed fluorescence of nuclei compared with none of controls. This confirms that silencing of cuti-1 expression causes the hypodermal membrane and cuticle to become highly permeable and no longer able to provide a protective barrier from the environment.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022591 cuti-1 ZC328.1 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC328.1 ZC328.1 609   I: 6404593-6404761

1 Laboratories

Primary Identifier
WT

2 Phenotype

Identifier Name Description
WBPhenotype:0000703 epithelial morphology variant Variations in the form, composition or structure of the layer of cells that cover the external surface of an organism and form the inner lining between the tissues and organs of that organism and the external environment compared to control. In C. elegans epithelial cells include epithelium of the alimentary tract, intestinal cells, hypodermis, interfacial cells and somatic gonad cells (Wormatlas).
WBPhenotype:0001211 cuticle integrity variant The physical strength or function of the cuticle varies from that observed for control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00033062

0 Strain