WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00114773 Genotype  GFP::MHC A
Phenotype Remark  Adults have body-wall muscle with disorganized thick filaments. Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation (Y108G3AL.1a).
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000838 cul-3 Y108G3AL.1 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y108G3AL.1a Y108G3AL.1a 2334   V: 177644-177700
CDS:Y108G3AL.1b Y108G3AL.1b 2154   V: 178593-179386
CDS:Y108G3AL.1c Y108G3AL.1c 723   V: 181483-181861
CDS:Y108G3AL.1d Y108G3AL.1d 342   V: 183691-183900

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000782 body wall muscle thick filament variant Animals exhibit variations in the form, structure or composition of a robust elongated cytoplasmic filament composed principally of myosin protein compared to control animals. In C. elegans, thick filaments also contain paramyosin and twitchin (Wormatlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00041265

0 Strain