WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00092809 Phenotype Remark  Defects in localization of thick filament and M-line components arise during embryonic elongation and become progressively more severe as development proceeds. This is consistent with preventing proper cytoskeletal reorganization during growth, rather than undermining structural integrity of the M-line.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006814 unc-82 B0496.3 Caenorhabditis elegans

9 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0496.3e B0496.3e 5382   IV: 7424500-7424797
CDS:B0496.3a B0496.3a 4452   IV: 7428934-7429045
CDS:B0496.3d B0496.3d 4665   IV: 7428934-7429045
CDS:B0496.3f B0496.3f 4635   IV: 7428934-7429045
CDS:B0496.3b B0496.3b 4737   IV: 7428934-7429045
CDS:B0496.3i B0496.3i 4788   IV: 7431348-7431510
CDS:B0496.3c B0496.3c 876   IV: 7442423-7442683
CDS:B0496.3g B0496.3g 4473   IV: 7428934-7429045
CDS:B0496.3h B0496.3h 4443   IV: 7428934-7429045

0 Laboratories

2 Phenotype

Identifier Name Description
WBPhenotype:0000782 body wall muscle thick filament variant Animals exhibit variations in the form, structure or composition of a robust elongated cytoplasmic filament composed principally of myosin protein compared to control animals. In C. elegans, thick filaments also contain paramyosin and twitchin (Wormatlas).
WBPhenotype:0001891 M line variant Animals exhibit variations in the form, structure or composition of a planar structure within the muscle sarcomere which lies midway within the thick filament (A) band, attaching to the plasma membrane at its base and running up towards the inward surface of the myofilament lattice, compared to control animals (Wormatlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00035423

0 Strain