WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00036570 Remark  bacterial-feeding RNAi began at the L1 larval stage
Secondary Identifier  MV_SV:mv_Y111B2G.d

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004161 pqn-80 Y111B2A.14 Caenorhabditis elegans

14 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y111B2A.14a Y111B2A.14a 4251   III: 12626575-12626718
CDS:Y111B2A.14s Y111B2A.14s 2448   III: 12626575-12626718
CDS:Y111B2A.14b Y111B2A.14b 4341   III: 12626575-12626718
CDS:Y111B2A.14f Y111B2A.14f 3681   III: 12628947-12629306
CDS:Y111B2A.14g Y111B2A.14g 3762   III: 12628947-12629306
CDS:Y111B2A.14h Y111B2A.14h 3672   III: 12628947-12629306
CDS:Y111B2A.14k Y111B2A.14k 3192   III: 12630583-12630678
CDS:Y111B2A.14c Y111B2A.14c 4350   III: 12626575-12626718
CDS:Y111B2A.14d Y111B2A.14d 4260   III: 12626575-12626718
CDS:Y111B2A.14e Y111B2A.14e 3771   III: 12628947-12629306
CDS:Y111B2A.14i Y111B2A.14i 3201   III: 12630583-12630678
CDS:Y111B2A.14j Y111B2A.14j 3111   III: 12630583-12630678
CDS:Y111B2A.14l Y111B2A.14l 3102   III: 12630583-12630678
CDS:Y111B2A.14t Y111B2A.14t 2448   III: 12626575-12626718

2 Laboratories

Primary Identifier
MV
SV

0 Phenotype

3 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000049 postembryonic development variant Any variation in the progression of an animal over time, from hatching to adulthood, compared to control.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024497

0 Strain