WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00088419 Phenotype Remark  Double RNAi experiment of coh-1(RNAi); coh-3(RNAi) resulted in the same phenotypes as single RNAi for coh-1.
Remark  paper remark: Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. Authors used yk226d1 (coh-1) and yk72e8 (coh-3).
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000591 coh-1 K08A8.3 Caenorhabditis elegans
WBGene00000592 coh-3 F08H9.1 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08A8.3d K08A8.3d 156   X: 7466321-7466476
CDS:K08A8.3b K08A8.3b 495   X: 7466321-7466491
CDS:F08H9.1 F08H9.1 1824   V: 14457475-14457536
CDS:K08A8.3a K08A8.3a 1794   X: 7466321-7466491
CDS:K08A8.3c K08A8.3c 414   X: 7466321-7466491

1 Laboratories

Primary Identifier
YM

1 Phenotype

Identifier Name Description
WBPhenotype:0000867 embryonic arrest Cessation of development during any stage occurring after fertilization and until hatching compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005937

1 Strain

WormBase ID
WBStrain00000001