WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00086237 Genotype  ccIs4251; lin-15B(n744)
Phenotype Remark  RNAi of isw-1 induces expression of GFP in body wall muscle nuclei from the ccIs4251 transgene in lin-15B(n744) mutants, suggesting that isw-1 is required for the tandem array modifier (TAM) phenotype of lin-15B(n744) mutants Remark  Authors state that yk clones yk593a10 and yk617c10 were used to target the isw-1 gene for knockdown by RNAi; yk617c10 used for curation
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002169 isw-1 F37A4.8 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F37A4.8 F37A4.8 3030   III: 6704216-6704392

1 Laboratories

Primary Identifier
MT

2 Phenotype

Identifier Name Description
WBPhenotype:0000962 level of transgene expression variant Any variation in the measured expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0001595 somatic transgene silencing variant Animals exhibit variations in the homology-dependent transcriptional level silencing of the expression of exogenous DNA that has been introduced into the organism, in the soma, compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00027681

0 Strain