WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00077211 Genotype  ppgp-5::gfp
Phenotype Remark  RNAi reduced pgp-5 induction in ppgp-5::gfp worms compared to control animals following cadmium exposure Remark  The ppgp-5::gfp reporter strain contains an integrated transgene, ppgp-5::gfp, in which the GFP-encoding gene is under the control of the 300 bp upstream sequence of the pgp-5 promoter.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004758 sek-1 R03G5.2 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R03G5.2 R03G5.2 1011   X: 7816804-7816816

1 Laboratories

Primary Identifier
WE

2 Phenotype

Identifier Name Description
WBPhenotype:0000962 level of transgene expression variant Any variation in the measured expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0001653 cadmium response variant Animals exhibit variations in their response to cadmium compared to that observed in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031023

0 Strain