WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00097925 Genotype  ced-1(e1935)
Phenotype Remark  ced-3 RNAi resulted in an 80% reduction of somatic programmed cell death in ced-1(e1935) engulfment-defective L1 larvae, as indicated by a decrease in the number of persistent cell corpses Remark  (Figure S1b) ced-3 RNAi. Authors state RNAi clones obtained from the Ahringer and Vidal laboratories, Ahringer clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000417 ced-3 C48D1.2 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48D1.2b C48D1.2b 864   IV: 13199230-13199292
CDS:C48D1.2a C48D1.2a 1512   IV: 13199230-13199292

1 Laboratories

Primary Identifier
TG

2 Phenotype

Identifier Name Description
WBPhenotype:0000965 somatic cell death variant Animals exhibit variations in the programmed cell death pathway that is triggered in cells other than germ cells and that is not subject to upstream checkpoint regulation.
WBPhenotype:0002045 cell corpse number decreased Animals exhibit fewer cell corpses compared to controls at the same developmental life stage.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004952

0 Strain