WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00080584

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007385 atp-5 C06H2.1 Caenorhabditis elegans
WBGene00007390 lmtr-3 C06H2.6 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06H2.1 C06H2.1 576   V: 11123114-11123149
CDS:C06H2.6a C06H2.6a 438   V: 11124310-11124409
CDS:C06H2.6b C06H2.6b 135   V: 11124724-11124858

1 Laboratories

Primary Identifier
MAD

0 Phenotype

3 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000154 reduced brood size The characteristic number of offspring produced is lower compared to that of control animals.
WBPhenotype:0000900 germ cell morphology variant Any variation in the morphological appearance of germ cells compared to control animals.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024200

1 Strain

WormBase ID
WBStrain00035144