WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00093381 Phenotype Remark  abu-12 RNAi resulted in increased pathogen susceptibility (decreased survival) of wild type animals exposed to pathogenic Pseudomonas aeruginosa bacteria
Remark  (Figure S8) abu-12 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004127 abu-12 F52D1.3 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52D1.3a F52D1.3a 2325   X: 450650-450703
CDS:F52D1.3b F52D1.3b 2475   X: 450650-450703
CDS:F52D1.3c F52D1.3c 2106   X: 450650-450703

1 Laboratories

Primary Identifier
AY

1 Phenotype

Identifier Name Description
WBPhenotype:0001013 pathogen susceptibility increased Animals are more prone to infection compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00038304

1 Strain

WormBase ID
WBStrain00000001