WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00093378 Genotype  octr-1(ok371)
Phenotype Remark  abu-7 RNAi partially suppressed the resistance to pathogenic Pseudomonas aeruginosa bacteria conferred by the octr-1(ok371) mutation Remark  (Figure 3C) abu-7 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

4 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000029 abu-6 C03A7.7 Caenorhabditis elegans
WBGene00000030 abu-7 C03A7.8 Caenorhabditis elegans
WBGene00000031 abu-8 C03A7.14 Caenorhabditis elegans
WBGene00004099 abu-15 C03A7.4 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C03A7.4 C03A7.4 1167   V: 5158623-5158847
CDS:C03A7.8 C03A7.8 1317   V: 5163396-5164487
CDS:C03A7.7 C03A7.7 1167   V: 5160678-5161619
CDS:C03A7.14 C03A7.14 1338   V: 5193139-5194251

1 Laboratories

Primary Identifier
AY

1 Phenotype

Identifier Name Description
WBPhenotype:0001013 pathogen susceptibility increased Animals are more prone to infection compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00038304

0 Strain