WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00093225 Genotype  zcIs4(hsp-4::GFP)
Phenotype Remark  ubql-1 RNAi resulted in an increase in expression of Erasin (UBXN-4) protein and an accumulation of ubiquitinated proteins, as determined by Western blot Remark  (Figure 9A) ubql-1 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008852 ubql-1 F15C11.2 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15C11.2b F15C11.2b 1455   I: 7021982-7022074
CDS:F15C11.2c F15C11.2c 1365   I: 7021982-7022074
CDS:F15C11.2a F15C11.2a 1509   I: 7021982-7022074

0 Laboratories

3 Phenotype

Identifier Name Description
WBPhenotype:0000119 protein expression increased Any change that results in higher than normal levels of protein expression compared to control animals.
WBPhenotype:0001236 transgene expression increased Any increase in the intensity of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0001865 protein ubiquitination variant Variations in the process by which one or more ubiquitin moieties are added to a protein, compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00035294

0 Strain