WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00101774 Phenotype Remark  mex-5/mex-6 double RNAi resulted in endogenous mom-2 mRNAs being uniformaly distributed in embryos beyond the 4-cell stage, likely the result of defective degradation of these mRNAs in somatic blastomeres.
Remark  (Figure S1A) mex-5/mex-6 double RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003230 mex-5 W02A2.7 Caenorhabditis elegans
WBGene00003231 mex-6 AH6.5 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:AH6.5 AH6.5 1404   II: 9524181-9524309
CDS:W02A2.7 W02A2.7 1407   IV: 13353730-13353843

1 Laboratories

Primary Identifier
TX

2 Phenotype

Identifier Name Description
WBPhenotype:0001826 RNA degradation variant Variations in the regulated breakdown of RNA species via the action of cellular enzymes (RNases) compared to control.
WBPhenotype:0001915 mRNA expression ectopic Any variation that results in the cellular expression of an mRNA in cells/tissues, that is otherwise not observed in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00044315

0 Strain