WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00101613 Genotype  wIs78 [SCMp::GFP marker transgene for seam cells]; let-7(n2853)
Phenotype Remark  lit-1 RNAi enhanced the retarded formation of alae in young adult let-7(n2853) animals Remark  (Figure 7B) lit-1 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003048 lit-1 W06F12.1 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06F12.1a W06F12.1a 1905   III: 13714045-13714184
CDS:W06F12.1b W06F12.1b 1389   III: 13718012-13718030
CDS:W06F12.1e W06F12.1e 1365   III: 13718359-13718466
CDS:W06F12.1c W06F12.1c 1314   III: 13719664-13719720
CDS:W06F12.1d W06F12.1d 1806   III: 13702192-13702246

1 Laboratories

Primary Identifier
CT

1 Phenotype

Identifier Name Description
WBPhenotype:0000168 alae secretion variant Variations in the regulated release of proteins needed for alae formation by epidermal seam cells compared to control. Alae are small linear ridges running along the lateral lines of the cuticle, lengthwise along the body (WormAtlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00037838

0 Strain