WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00082390

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

4 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000876 cyl-1 C52E4.6 Caenorhabditis elegans
WBGene00001553 gcy-33 F57F5.2 Caenorhabditis elegans
WBGene00008259 C52E4.7 C52E4.7 Caenorhabditis elegans
WBGene00194785 C52E4.12 C52E4.12 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C52E4.7 C52E4.7 855   V: 11994321-11994518
CDS:F57F5.2a F57F5.2a 2838   V: 11995868-11995993
CDS:C52E4.12 C52E4.12 186   V: 11996180-11996245
CDS:C52E4.6a C52E4.6a 1443   V: 11991164-11991238
CDS:F57F5.2b F57F5.2b 726   V: 11995868-11995993
CDS:F57F5.2c F57F5.2c 2844   V: 11995868-11995993

1 Laboratories

Primary Identifier
OP

5 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000031 slow growth Any variation that causes a reduction in growth rate compared to control.
WBPhenotype:0000054 larval lethal The animal dies at any time between hatching and onset to adulthood.
WBPhenotype:0000060 adult lethal Premature lethality during the adult stage. When applied to large-scale RNAi screens in C. elegans, this phenotype is present in at least 10% of analyzed worms, or at least 30% in the case of rrf-3 perturbed background.
WBPhenotype:0001010 clear Animals appear unusually transparent when compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036429

0 Strain