WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00059906 Phenotype Remark  lin-42(RNAi) substantially increased the survival rate of let-7(n2853ts) animals. It also partially restored alae formation in let-7(n2853ts) young adult animals.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018572 lin-42 F47F6.1 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47F6.1e F47F6.1e 1011   II: 1234175-1234429
CDS:F47F6.1d F47F6.1d 1965   II: 1234175-1234429
CDS:F47F6.1a F47F6.1a 894   II: 1234175-1234429
CDS:F47F6.1b F47F6.1b 1794   II: 1234175-1234429
CDS:F47F6.1g F47F6.1g 297   II: 1234175-1234429

1 Laboratories

Primary Identifier
CT

2 Phenotype

Identifier Name Description
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000202 alae variant Any variation in the small linear ridges running along the lateral lines of the cuticle, lengthwise along the body compared to control (Wormatlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024931

1 Strain

WormBase ID
WBStrain00027302