WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00072408 Phenotype Remark  RNAi phenotype in lin-35(n2239) worms was reproducibly stronger than those observed in WT (primary screen) and rrf-3(pk1426) (secondary screen) animals.
Remark  candidate lin-35 interacting gene based on results of the secondary screen

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

3 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000612 col-35 C15A11.1 Caenorhabditis elegans
WBGene00006754 unc-15 F07A5.7 Caenorhabditis elegans
WBGene00007597 C15A11.2 C15A11.2 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C15A11.1 C15A11.1 1029   I: 7385907-7386935
CDS:F07A5.7a F07A5.7a 2619   I: 7377295-7377321
CDS:F07A5.7b F07A5.7b 1662   I: 7377295-7377321

1 Laboratories

Primary Identifier
SV

3 Phenotype

Identifier Name Description
WBPhenotype:0000154 reduced brood size The characteristic number of offspring produced is lower compared to that of control animals.
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000032 sick Animals exhibit some combination of abnormal features relating to size, movement, body integrity, pigmentation, viability, fertility etc.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00029258

1 Strain

WormBase ID
WBStrain00000001