WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00008137 Phenotype Remark  % penetrance range
Remark  PCR product used to make dsRNA was amplified from genomic DNA. Secondary Identifier  PF:GL1_7D7

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019120 npl-4.1 F59E12.4 Caenorhabditis elegans
WBGene00019121 npl-4.2 F59E12.5 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59E12.5a F59E12.5a 1584   II: 5622897-5623040
CDS:F59E12.4a F59E12.4a 1584   II: 5631359-5631502
CDS:F59E12.4b F59E12.4b 1590   II: 5631359-5631502
CDS:F59E12.5b F59E12.5b 1590   II: 5622897-5623040

1 Laboratories

Primary Identifier
KK

10 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.
WBPhenotype:0001121 exaggerated asynchrony early emb Asynchrony of the second division is exaggerated and P1 divides more slowly than normal.
WBPhenotype:0001082 large cytoplasmic granules early emb Abnormally large granules are observed in the cytoplasm of P0.
WBPhenotype:0001119 cell cycle slow early emb Embryos take longer to divide during the first and second cell divisions.
WBPhenotype:0001156 pronuclear size defective early emb Maternal or paternal pronucleus is either too small or too large.
WBPhenotype:0001080 excessive blebbing early emb Excessive shaking and movements are seen in the cell membrane or cytoplasm of one-cell or two-cell embryos.
WBPhenotype:0001186 embryo delayed at pronuclear contact early emb Embryos are either delayed or arrested at pronuclear contact.
WBPhenotype:0001150 polar body reabsorbed one two early emb A polar body is reabsorbed in either the one cell- or the two-cell embryo.
WBPhenotype:0001126 cell cell contacts abnormal in four cell embryo Aba, ABp, EMS, or P1 contacts fewer of its sister cells than in control embryos.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005599

1 Strain

WormBase ID
WBStrain00000001