WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00036629 Phenotype Remark  penetrance is less than 90%
Remark  bacterial-feeding RNAi began at the L1 larval stage Secondary Identifier  MV_SV:mv_Y119C1B.d

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022473 bet-1 Y119C1B.8 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y119C1B.8e Y119C1B.8e 2565   I: 4526395-4526490
CDS:Y119C1B.8a Y119C1B.8a 2562   I: 4526395-4526490
CDS:Y119C1B.8b Y119C1B.8b 2553   I: 4526395-4526490
CDS:Y119C1B.8c Y119C1B.8c 2559   I: 4526395-4526490
CDS:Y119C1B.8d Y119C1B.8d 2559   I: 4526395-4526490
CDS:Y119C1B.8f Y119C1B.8f 2568   I: 4526395-4526490
CDS:Y119C1B.8g Y119C1B.8g 2568   I: 4526395-4526490
CDS:Y119C1B.8h Y119C1B.8h 2574   I: 4526395-4526490

2 Laboratories

Primary Identifier
MV
SV

3 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000032 sick Animals exhibit some combination of abnormal features relating to size, movement, body integrity, pigmentation, viability, fertility etc.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024497

0 Strain