WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00002106 Phenotype Remark  %penetrance
Remark  yk374h5 Secondary Identifier  SA:yk374h5

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

5 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022121 cogc-3 Y71F9AM.4 Caenorhabditis elegans
WBGene00045398 Y71F9AM.8 Y71F9AM.8 Caenorhabditis elegans
WBGene00044928 Y71F9AM.7 Y71F9AM.7 Caenorhabditis elegans
WBGene00306080 Y71F9AM.11 Y71F9AM.11 Caenorhabditis elegans
WBGene00271781 Y71F9AM.9 Y71F9AM.9 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71F9AM.4a Y71F9AM.4a 2385   I: 2931461-2931548
CDS:Y71F9AM.4b Y71F9AM.4b 1434   I: 2936042-2936130
CDS:Y71F9AM.11 Y71F9AM.11 297   I: 2939519-2939743
CDS:Y71F9AM.8 Y71F9AM.8 255   I: 2940969-2941127

2 Laboratories

Primary Identifier
SA
YK

3 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000032 sick Animals exhibit some combination of abnormal features relating to size, movement, body integrity, pigmentation, viability, fertility etc.
WBPhenotype:0000229 small Animals are shorter and thinner than control animals at the same developmental stage.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004651

0 Strain