WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00086210 Remark  Authors state that yk clone yk169c6 was used to target the pyp-1 gene for knockdown by RNAi; only 5 sequence available for the clone; coding sequence including and downstream of the yk169c6 clone used for curation
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008149 pyp-1 C47E12.4 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C47E12.4d C47E12.4d 879   IV: 9995724-9995859
CDS:C47E12.4a C47E12.4a 1017   IV: 9995724-9995859
CDS:C47E12.4c C47E12.4c 1284   IV: 9995724-9995859

1 Laboratories

Primary Identifier
MT

1 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00027681

0 Strain