WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00089534 Genotype  sep-1(ax110)
Phenotype Remark  pph-5 RNAi suppresses the embryonic lethality and SEP-1 subcellular mislocalization of the sep-1(ax110) mutation Remark  (Table 1) pph-5 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012665 pph-5 Y39B6A.2 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39B6A.2a Y39B6A.2a 1491   V: 19190555-19190678

1 Laboratories

Primary Identifier
AG

2 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0001403 antibody subcellular localization variant Any variation in the placement of a protein, as detected by antibody staining, within in a cell or cellular compartment compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040142

0 Strain